Staden 2.0.0b11

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows. ...

Author Rodger Staden
License Open Source
Price FREE
Released 2016-04-25
Downloads 457
Filesize 20.10 MB
Requirements
Installation Instal And Uninstall
Keywords DNA, Gap4, Gap5, Spin, trev, ancillary tools, Staden Package
Users' rating
(6 rating)
StadenScienceWindows 2000, Windows 2003, Windows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Linux, Mac OS X
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Staden reference files - The Latest User Reviews

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Unipro UGENE for Mac

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... Extremely fast repeat finder; DNA short reads to reference alignment using Bowtie; De novo assembly with CAP3; ... Multiple alignment editor; Chromatograms visualization; 3D viewer for files in PDB and MMDB formats with anaglyph stereo ...

Staden

2.0.0b11 download

... has an additional depadded option to use original reference sequence coordinates. Note this isn't 100% robust as ... This uses the @RG "PL"atform heading in BAM files. The List Libraries window permits editing of this ...

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... Extremely fast repeat finder; DNA short reads to reference alignment using Bowtie; De novo assembly with CAP3; ... Multiple alignment editor; Chromatograms visualization; 3D viewer for files in PDB and MMDB formats with anaglyph stereo ...

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... a toolbox for developing and processing of NTv2 files in binary and ASCII formats. With the included tools NTv2 files can be analyzed and graphically or textual displayed, ... of them can be extracted to new NTv2 files. By means of NTv2 grid files it is ...