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VarScan 2.4.6

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The advent of massively parallel sequencing technologies has fundamentally changed the study of genetics. New platforms like the Illumina GAIIx and the Roche GS yield unprecedented levels of sequencing throughput. The analysis and interpretation of data from next-generation sequencing platforms presents a substantial informatics challenge. ...

Author Dan Koboldt
License Open Source
Price FREE
Released 2023-03-28
Downloads 225
Filesize 123 kB
Requirements
Installation Instal And Uninstall
Keywords SNP identifier, identify SNP, filter variant, identify, identifier, SNP
Users' rating
(5 rating)
VarScanCADWindows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64, Windows 8, Windows 8 x64, Windows 10, Windows 10 x64, Windows 11, Linux, Mac OS X
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... a tumor-normal pair, VarScan also determines the somatic status of each variant (Germline, Somatic, or LOH) by ... variant frequency, and base quality · Determines somatic status (Somatic, Germline, LOH) for Tumor-Normal pairs · Compares, ...