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AMDORAP 1.0.6
An easy-to-use, flexible and automated tool is a key to success in metabolomics studies. This is particularly the case in high-resolution MS analyses mainly because of the data size. Our aim is to estimate more accurate m/z values and extract interesting m/z values from raw data in comparative LC-orbitrap analysis. This project has been developed a novel straightforward m/z detection method, AMDORAP (Accurate m/z detection method for LC-orbitrap) for high-resolution MS (e.g., the orbitrap) by taking advantage of its stable mass accuracy.
AMDORAP is written in the R programming language in order to attain the quick comparison of metabolic profiling by high-resolution MS. The AMDORAP procedure, which comprises three steps:
Collect data points with intensities larger than a threshold for all samples.
Group collected data points by m/z closeness, and estimate representative m/z values for individual m/z groups.
Extract ion chromatograms for the m/z list.
| Author | Hiroki Takahashi |
| License | Open Source |
| Price | FREE |
| Released | 2012-01-03 |
| Downloads | 181 |
| Filesize | 37.30 MB |
| Requirements | |
| Installation | Instal And Uninstall |
| Keywords | LC-MS data, LC-MS preprocessor, M/z detection, detection, detect |
| Users' rating (3 rating) |
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